create database kegg_db;
use kegg_db;

-- MySQL dump 10.10
--
-- Host: localhost    Database: kegg_db
-- ------------------------------------------------------
-- Server version	5.0.22-community-nt

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--
-- Table structure for table `data_monitor`
--

DROP TABLE IF EXISTS `data_monitor`;
CREATE TABLE `data_monitor` (
  `dm_id` bigint(20) unsigned NOT NULL auto_increment,
  `user_name` varchar(50) NOT NULL,
  `table_name` varchar(50) NOT NULL,
  `entry_id` varchar(50) NOT NULL,
  `insert_date` date NOT NULL,
  PRIMARY KEY  (`dm_id`),
  UNIQUE KEY `dm_id` (`dm_id`),
  KEY `user_name` (`user_name`),
  KEY `table_name` (`table_name`),
  KEY `entry_id` (`entry_id`),
  KEY `insert_date` (`insert_date`)
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `enzyme`
--

DROP TABLE IF EXISTS `enzyme`;
CREATE TABLE `enzyme` (
  `sb_id` bigint(20) unsigned NOT NULL,
  `ec_number` varchar(50) default NULL,
  `swiss_prot_id` varchar(50) default NULL,
  `gene_ontology_number` varchar(50) default NULL,
  PRIMARY KEY  (`sb_id`),
  UNIQUE KEY `sb_id` (`sb_id`),
  CONSTRAINT `enzyme_ibfk_1` FOREIGN KEY (`sb_id`) REFERENCES `substance` (`sb_id`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `kegg`
--

DROP TABLE IF EXISTS `kegg`;
CREATE TABLE `kegg` (
  `kegg_id` varchar(50) NOT NULL,
  PRIMARY KEY  (`kegg_id`),
  UNIQUE KEY `kegg_id` (`kegg_id`)
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `participate_reaction`
--

DROP TABLE IF EXISTS `participate_reaction`;
CREATE TABLE `participate_reaction` (
  `sb_id` bigint(20) unsigned NOT NULL,
  `r_id` bigint(20) unsigned NOT NULL,
  `tag` enum('substrate','product','enzyme','activator','inhibitor') NOT NULL,
  `numerator` tinyint(3) unsigned NOT NULL,
  `stoich_coeff` tinyint(3) unsigned default NULL,
  PRIMARY KEY  (`sb_id`,`r_id`,`tag`,`numerator`),
  KEY `sb_id` (`sb_id`),
  KEY `r_id` (`r_id`),
  CONSTRAINT `participate_reaction_ibfk_1` FOREIGN KEY (`sb_id`) REFERENCES `substance` (`sb_id`) ON DELETE CASCADE ON UPDATE CASCADE,
  CONSTRAINT `participate_reaction_ibfk_2` FOREIGN KEY (`r_id`) REFERENCES `reaction` (`r_id`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `reac_has_kegg`
--

DROP TABLE IF EXISTS `reac_has_kegg`;
CREATE TABLE `reac_has_kegg` (
  `r_id` bigint(20) unsigned NOT NULL,
  `kegg_id` varchar(50) NOT NULL,
  PRIMARY KEY  (`r_id`,`kegg_id`),
  KEY `r_id` (`r_id`),
  KEY `kegg_id` (`kegg_id`),
  CONSTRAINT `reac_has_kegg_ibfk_1` FOREIGN KEY (`kegg_id`) REFERENCES `kegg` (`kegg_id`) ON DELETE CASCADE ON UPDATE CASCADE,
  CONSTRAINT `reac_has_kegg_ibfk_2` FOREIGN KEY (`r_id`) REFERENCES `reaction` (`r_id`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `reaction`
--

DROP TABLE IF EXISTS `reaction`;
CREATE TABLE `reaction` (
  `r_id` bigint(20) unsigned NOT NULL auto_increment,
  `formula` varchar(255) default NULL,
  `description` text,
  `name` varchar(255) default NULL,
  PRIMARY KEY  (`r_id`),
  UNIQUE KEY `r_id` (`r_id`)
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `reaction_system`
--

DROP TABLE IF EXISTS `reaction_system`;
CREATE TABLE `reaction_system` (
  `sys_id` bigint(20) unsigned NOT NULL auto_increment,
  `name` varchar(255) default NULL,
  `description` text,
  PRIMARY KEY  (`sys_id`),
  UNIQUE KEY `sys_id` (`sys_id`)
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `sb_has_kegg`
--

DROP TABLE IF EXISTS `sb_has_kegg`;
CREATE TABLE `sb_has_kegg` (
  `sb_id` bigint(20) unsigned NOT NULL,
  `kegg_id` varchar(50) NOT NULL,
  PRIMARY KEY  (`sb_id`),
  UNIQUE KEY `sb_id` (`sb_id`),
  KEY `kegg_id` (`kegg_id`),
  CONSTRAINT `sb_has_kegg_ibfk_1` FOREIGN KEY (`sb_id`) REFERENCES `substance` (`sb_id`) ON DELETE CASCADE ON UPDATE CASCADE,
  CONSTRAINT `sb_has_kegg_ibfk_2` FOREIGN KEY (`kegg_id`) REFERENCES `kegg` (`kegg_id`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `substance`
--

DROP TABLE IF EXISTS `substance`;
CREATE TABLE `substance` (
  `sb_id` bigint(20) unsigned NOT NULL auto_increment,
  `display_name` varchar(255) NOT NULL,
  `synonyms` text,
  PRIMARY KEY  (`sb_id`),
  UNIQUE KEY `sb_id` (`sb_id`)
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `sys_contains_reac`
--

DROP TABLE IF EXISTS `sys_contains_reac`;
CREATE TABLE `sys_contains_reac` (
  `r_id` bigint(20) unsigned NOT NULL,
  `sys_id` bigint(20) unsigned NOT NULL,
  PRIMARY KEY  (`r_id`,`sys_id`),
  KEY `r_id` (`r_id`),
  KEY `sys_id` (`sys_id`),
  CONSTRAINT `sys_contains_reac_ibfk_1` FOREIGN KEY (`r_id`) REFERENCES `reaction` (`r_id`) ON DELETE CASCADE ON UPDATE CASCADE,
  CONSTRAINT `sys_contains_reac_ibfk_2` FOREIGN KEY (`sys_id`) REFERENCES `reaction_system` (`sys_id`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


--
-- Table structure for table `sys_has_kegg`
--

DROP TABLE IF EXISTS `sys_has_kegg`;
CREATE TABLE `sys_has_kegg` (
  `sys_id` bigint(20) unsigned NOT NULL,
  `kegg_id` varchar(50) NOT NULL,
  PRIMARY KEY  (`sys_id`,`kegg_id`),
  KEY `sys_id` (`sys_id`),
  KEY `kegg_id` (`kegg_id`),
  CONSTRAINT `sys_has_kegg_ibfk_1` FOREIGN KEY (`sys_id`) REFERENCES `reaction_system` (`sys_id`) ON DELETE CASCADE ON UPDATE CASCADE,
  CONSTRAINT `sys_has_kegg_ibfk_2` FOREIGN KEY (`kegg_id`) REFERENCES `kegg` (`kegg_id`) ON DELETE CASCADE ON UPDATE CASCADE
) ENGINE=InnoDB DEFAULT CHARSET=latin1;


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